Novel Structural and Functional Motifs in cellulose synthase (CesA) Genes of Bread Wheat (Triticum aestivum, L.).
Identifieur interne : 001748 ( Main/Exploration ); précédent : 001747; suivant : 001749Novel Structural and Functional Motifs in cellulose synthase (CesA) Genes of Bread Wheat (Triticum aestivum, L.).
Auteurs : Simerjeet Kaur [Canada] ; Kanwarpal S. Dhugga [États-Unis] ; Kulvinder Gill [États-Unis] ; Jaswinder Singh [Canada]Source :
- PloS one [ 1932-6203 ] ; 2016.
Descripteurs français
- KwdFr :
- MESH :
- composition chimique : Glucosyltransferases, Protéines végétales.
- enzymologie : Triticum.
- métabolisme : Glucosyltransferases, Protéines végétales.
- Régulation de l'expression des gènes végétaux.
English descriptors
- KwdEn :
- MESH :
- chemical , chemistry : Glucosyltransferases, Plant Proteins.
- chemical , metabolism : Glucosyltransferases, Plant Proteins.
- enzymology : Triticum.
- Gene Expression Regulation, Plant.
Abstract
Cellulose is the primary determinant of mechanical strength in plant tissues. Late-season lodging is inversely related to the amount of cellulose in a unit length of the stem. Wheat is the most widely grown of all the crops globally, yet information on its CesA gene family is limited. We have identified 22 CesA genes from bread wheat, which include homoeologs from each of the three genomes, and named them as TaCesAXA, TaCesAXB or TaCesAXD, where X denotes the gene number and the last suffix stands for the respective genome. Sequence analyses of the CESA proteins from wheat and their orthologs from barley, maize, rice, and several dicot species (Arabidopsis, beet, cotton, poplar, potato, rose gum and soybean) revealed motifs unique to monocots (Poales) or dicots. Novel structural motifs CQIC and SVICEXWFA were identified, which distinguished the CESAs involved in the formation of primary and secondary cell wall (PCW and SCW) in all the species. We also identified several new motifs specific to monocots or dicots. The conserved motifs identified in this study possibly play functional roles specific to PCW or SCW formation. The new insights from this study advance our knowledge about the structure, function and evolution of the CesA family in plants in general and wheat in particular. This information will be useful in improving culm strength to reduce lodging or alter wall composition to improve biofuel production.
DOI: 10.1371/journal.pone.0147046
PubMed: 26771740
PubMed Central: PMC4714848
Affiliations:
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Dhugga</name><affiliation wicri:level="2"><nlm:affiliation>Genetic Discovery, DuPont Pioneer, 7300 NW 62nd Avenue, Johnston, IA, United States of America.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Genetic Discovery, DuPont Pioneer, 7300 NW 62nd Avenue, Johnston, IA</wicri:regionArea><placeName><region type="state">Iowa</region></placeName></affiliation></author><author><name sortKey="Gill, Kulvinder" sort="Gill, Kulvinder" uniqKey="Gill K" first="Kulvinder" last="Gill">Kulvinder Gill</name><affiliation wicri:level="2"><nlm:affiliation>Department of Crop and Soil Science, Washington State University, Pullman, WA, United States of America.</nlm:affiliation><country xml:lang="fr">États-Unis</country><wicri:regionArea>Department of Crop and Soil Science, Washington State University, Pullman, WA</wicri:regionArea><placeName><region type="state">Washington (État)</region></placeName></affiliation></author><author><name sortKey="Singh, Jaswinder" sort="Singh, Jaswinder" uniqKey="Singh J" first="Jaswinder" last="Singh">Jaswinder Singh</name><affiliation wicri:level="4"><nlm:affiliation>Department of Plant Science, McGill University, Sainte Anne de Bellevue, QC, Canada.</nlm:affiliation><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Plant Science, McGill University, Sainte Anne de Bellevue, QC</wicri:regionArea><orgName type="university">Université McGill</orgName><placeName><settlement type="city">Montréal</settlement><region type="state">Québec</region></placeName></affiliation></author></analytic><series><title level="j">PloS one</title><idno type="eISSN">1932-6203</idno><imprint><date when="2016" type="published">2016</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Gene Expression Regulation, Plant (MeSH)</term><term>Glucosyltransferases (chemistry)</term><term>Glucosyltransferases (metabolism)</term><term>Plant Proteins (chemistry)</term><term>Plant Proteins (metabolism)</term><term>Triticum (enzymology)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>Glucosyltransferases (composition chimique)</term><term>Glucosyltransferases (métabolisme)</term><term>Protéines végétales (composition chimique)</term><term>Protéines végétales (métabolisme)</term><term>Régulation de l'expression des gènes végétaux (MeSH)</term><term>Triticum (enzymologie)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="chemistry" xml:lang="en"><term>Glucosyltransferases</term><term>Plant Proteins</term></keywords><keywords scheme="MESH" type="chemical" qualifier="metabolism" xml:lang="en"><term>Glucosyltransferases</term><term>Plant Proteins</term></keywords><keywords scheme="MESH" qualifier="composition chimique" xml:lang="fr"><term>Glucosyltransferases</term><term>Protéines végétales</term></keywords><keywords scheme="MESH" qualifier="enzymologie" xml:lang="fr"><term>Triticum</term></keywords><keywords scheme="MESH" qualifier="enzymology" xml:lang="en"><term>Triticum</term></keywords><keywords scheme="MESH" qualifier="métabolisme" xml:lang="fr"><term>Glucosyltransferases</term><term>Protéines végétales</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Gene Expression Regulation, Plant</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Régulation de l'expression des gènes végétaux</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Cellulose is the primary determinant of mechanical strength in plant tissues. Late-season lodging is inversely related to the amount of cellulose in a unit length of the stem. Wheat is the most widely grown of all the crops globally, yet information on its CesA gene family is limited. We have identified 22 CesA genes from bread wheat, which include homoeologs from each of the three genomes, and named them as TaCesAXA, TaCesAXB or TaCesAXD, where X denotes the gene number and the last suffix stands for the respective genome. Sequence analyses of the CESA proteins from wheat and their orthologs from barley, maize, rice, and several dicot species (Arabidopsis, beet, cotton, poplar, potato, rose gum and soybean) revealed motifs unique to monocots (Poales) or dicots. Novel structural motifs CQIC and SVICEXWFA were identified, which distinguished the CESAs involved in the formation of primary and secondary cell wall (PCW and SCW) in all the species. We also identified several new motifs specific to monocots or dicots. The conserved motifs identified in this study possibly play functional roles specific to PCW or SCW formation. The new insights from this study advance our knowledge about the structure, function and evolution of the CesA family in plants in general and wheat in particular. This information will be useful in improving culm strength to reduce lodging or alter wall composition to improve biofuel production. </div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">26771740</PMID><DateCompleted><Year>2016</Year><Month>07</Month><Day>11</Day></DateCompleted><DateRevised><Year>2019</Year><Month>02</Month><Day>22</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Electronic">1932-6203</ISSN><JournalIssue CitedMedium="Internet"><Volume>11</Volume><Issue>1</Issue><PubDate><Year>2016</Year></PubDate></JournalIssue><Title>PloS one</Title><ISOAbbreviation>PLoS One</ISOAbbreviation></Journal><ArticleTitle>Novel Structural and Functional Motifs in cellulose synthase (CesA) Genes of Bread Wheat (Triticum aestivum, L.).</ArticleTitle><Pagination><MedlinePgn>e0147046</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.1371/journal.pone.0147046</ELocationID><Abstract><AbstractText>Cellulose is the primary determinant of mechanical strength in plant tissues. Late-season lodging is inversely related to the amount of cellulose in a unit length of the stem. Wheat is the most widely grown of all the crops globally, yet information on its CesA gene family is limited. We have identified 22 CesA genes from bread wheat, which include homoeologs from each of the three genomes, and named them as TaCesAXA, TaCesAXB or TaCesAXD, where X denotes the gene number and the last suffix stands for the respective genome. Sequence analyses of the CESA proteins from wheat and their orthologs from barley, maize, rice, and several dicot species (Arabidopsis, beet, cotton, poplar, potato, rose gum and soybean) revealed motifs unique to monocots (Poales) or dicots. Novel structural motifs CQIC and SVICEXWFA were identified, which distinguished the CESAs involved in the formation of primary and secondary cell wall (PCW and SCW) in all the species. We also identified several new motifs specific to monocots or dicots. The conserved motifs identified in this study possibly play functional roles specific to PCW or SCW formation. The new insights from this study advance our knowledge about the structure, function and evolution of the CesA family in plants in general and wheat in particular. This information will be useful in improving culm strength to reduce lodging or alter wall composition to improve biofuel production. </AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Kaur</LastName><ForeName>Simerjeet</ForeName><Initials>S</Initials><AffiliationInfo><Affiliation>Department of Plant Science, McGill University, Sainte Anne de Bellevue, QC, Canada.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Dhugga</LastName><ForeName>Kanwarpal S</ForeName><Initials>KS</Initials><AffiliationInfo><Affiliation>Genetic Discovery, DuPont Pioneer, 7300 NW 62nd Avenue, Johnston, IA, United States of America.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Gill</LastName><ForeName>Kulvinder</ForeName><Initials>K</Initials><AffiliationInfo><Affiliation>Department of Crop and Soil Science, Washington State University, Pullman, WA, United States of America.</Affiliation></AffiliationInfo></Author><Author 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last="Kaur">Simerjeet Kaur</name></region><name sortKey="Singh, Jaswinder" sort="Singh, Jaswinder" uniqKey="Singh J" first="Jaswinder" last="Singh">Jaswinder Singh</name></country><country name="États-Unis"><region name="Iowa"><name sortKey="Dhugga, Kanwarpal S" sort="Dhugga, Kanwarpal S" uniqKey="Dhugga K" first="Kanwarpal S" last="Dhugga">Kanwarpal S. Dhugga</name></region><name sortKey="Gill, Kulvinder" sort="Gill, Kulvinder" uniqKey="Gill K" first="Kulvinder" last="Gill">Kulvinder Gill</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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